CDS

Accession Number TCMCG051C23548
gbkey CDS
Protein Id XP_024460859.1
Location complement(join(11834428..11834535,11834537..11834633,11834801..11834928,11835119..11835309,11835412..11835467,11835469..11835659))
Gene LOC18100948
GeneID 18100948
Organism Populus trichocarpa

Protein

Length 257aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024605091.1
Definition LOW QUALITY PROTEIN: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category C
Description Succinate dehydrogenase ubiquinone iron-sulfur subunit
KEGG_TC -
KEGG_Module M00009        [VIEW IN KEGG]
M00011        [VIEW IN KEGG]
M00148        [VIEW IN KEGG]
KEGG_Reaction R02164        [VIEW IN KEGG]
KEGG_rclass RC00045        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00235        [VIEW IN KEGG]
EC 1.3.5.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00020        [VIEW IN KEGG]
ko00190        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04932        [VIEW IN KEGG]
ko05010        [VIEW IN KEGG]
ko05012        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
map00020        [VIEW IN KEGG]
map00190        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04932        [VIEW IN KEGG]
map05010        [VIEW IN KEGG]
map05012        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
GOs GO:0000104        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006119        [VIEW IN EMBL-EBI]
GO:0006121        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006163        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009055        [VIEW IN EMBL-EBI]
GO:0009060        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009123        [VIEW IN EMBL-EBI]
GO:0009126        [VIEW IN EMBL-EBI]
GO:0009141        [VIEW IN EMBL-EBI]
GO:0009144        [VIEW IN EMBL-EBI]
GO:0009150        [VIEW IN EMBL-EBI]
GO:0009161        [VIEW IN EMBL-EBI]
GO:0009167        [VIEW IN EMBL-EBI]
GO:0009199        [VIEW IN EMBL-EBI]
GO:0009205        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0022900        [VIEW IN EMBL-EBI]
GO:0022904        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042773        [VIEW IN EMBL-EBI]
GO:0042775        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045273        [VIEW IN EMBL-EBI]
GO:0045281        [VIEW IN EMBL-EBI]
GO:0045333        [VIEW IN EMBL-EBI]
GO:0046034        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0070469        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098803        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990204        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGAAGAGCAGCTGCTTACGCAATGGCTACAGCAAGGTAGCCCGTGTGCTCGGCAAGGGAGACCCCAAGAAGCAAGACCTTCCAATGGTAGAAGACCACCCTGCGGGACAACAACATGCACAAGAAACCGTGGAGACGTATGGTACAGTAACAAATAACATAAAAAGGCTAATCAAGGAGTTCAGAATTCCCTACCAGAAACCCTATCTCCATTCTTACTTCATAGACCTATCCAAATGCGGTGCAGTTGAAAATGATTATCGTTATGTTGGTGTGTATAAGGTGTTGGATGTGTTACAGAAGATAAAAGCAGAGGATGATTCAACTCTGGTCATGCAGGGAAGGGATATGTGGAATTGTGGATCATGTGCCATGAATGTTGATGGGACTAACACTGTGGCCTTCCTTAAGCCCGTTGATGCAGCCACCGGCGAGACAACAAAGGCACCTGAGTGTATCCTTTGTGCTTGTTGCAGTGCTTCATGCCTGTCGTATTGGTGGAACCCCGAGGAATTCCTTGGACCTGCTCCTTTGCTCCAAGCTTATCGATGGATCTGTGACAGTAGGAATGAATTTGCGGATGAAAGGTTGCAAGCATTAACGGAAGATCACATGAGATTATACAGATGCAGAACTATGAAGAATTGCACTGCTATCTGCCCCAAAAGCCTAAATCCTGCCGATGCTATTCACAAGATGAAGATTAGGCATTTACTTTCTGTGCGAACGGAGGAAGTGGAAACCGATAACAGTGTCAAAGTAGGCTAA
Protein:  
MSKSSCLRNGYSKVARVLGKGDPKKQDLPMVEDHPAGQQHAQETVETYGTVTNNIKRLIKEFRIXPYQKPYLHSYFIDLSKCGAVENDYRYVGVYKVLDVLQKIKAEDDSTLVMQGRDMWNCGSCAMNVDGTNTVAFLKPVDAATGETTKAPECILCACCSASCLSYWWNPEEFLGPAPLLQAYRWICDSRNEFADERLQALTEDHMRLYRCRTMKNCTAICPKSLNPADAIHKMKIRHLLSVRTEEVETDNSVKVG